Publication

Conference Paper

  • Prediction of drug-disease associations and their effects by signed network-based nonnegative matrix factorization, IEEE Internatinal Conference on Bioinformatics and Biomedicine 2018 (BIBM 2018) , Dec. 2018, Wen Zhang, Feng Huang, Xiang Yue, Xiaoting Lu, Weitai Yang, Zhishuai Li, and Feng Liu (to appear)
  • Prediction of drug-disease associations based on ensemble meta paths and singular value decomposition, The 17th Asia Pacific Bioinformatics Conference (APBC 2019) , Jan. 2019, Guangsheng Wu, Juan Liu and Xiang Yue (to appear)
  • Predicting drug-disease associations based on the known association bipartite network, IEEE Internatinal Conference on Bioinformatics and Biomedicine 2017 (BIBM 2017) , Nov. 2017, Wen Zhang, Xiang Yue, Yanlin Chen, Weiran Lin, Bolin Li, Feng Liu, Xiaohong Li, (Regualar Paper, Accepted, Rate: 79/414=19.0%) [Paper] [Slides]
  • Predicting small RNAs in bacteria via sequence learning ensemble method, IEEE Internatinal Conference on Bioinformatics and Biomedicine 2017 (BIBM 2017) , Nov. 2017, Wen Zhang, Jingwen Shi, Guifeng Tang, Wenjian Wu, Xiang Yue, Dingfang Li (Short Paper, Accepted) [Paper] [Slides]

Journal Paper

  • Predicting drug-disease associations by using similarity constrained matrix factorization, BMC Bioinformatics, May 2018, Wen Zhang, Xiang Yue, Weiran Lin, Wenjian Wu, Ruoqi Liu, Feng Huang, Feng Liu [Paper]
  • Predicting drug-disease associations and their therapeutic function based on the drug-disease association bipartite network, Methods, May 2018, Wen Zhang, Xiang Yue, Feng Huang, Ruoqi Liu, Yanlin Chen, Feng Huang, Chunyang Ruan [Paper]
  • A unified frame of predicting side effects of drugs by using linear neighborhood similarity, BMC Systems Biology, Dec. 2017, Wen Zhang, Xiang Yue, Feng Liu, Yanlin Chen, Shikui Tu, Qianlong Qu, Xining Zhang [Paper]